That shows the lookup done to the clustered index. So whenever a NC index is not covering and there's a key lookup, that's a lookup to the clustered index.
As far as I'm aware, user_lookups will only be > 0 for clustered indexes (key lookups) and heaps (rid lookups)
Gail Shaw
Microsoft Certified Master: SQL Server, MVP, M.Sc (Comp Sci)
SQL In The Wild: Discussions on DB performance with occasional diversions into recoverability