There have been a couple of fixes in SQLCover this week, kindly submitted by John Mclusky (https://github.com/jmclusky):

Code coverage not reported correctly for CTEs at the end of a stored procedure if the ‘with’ is immediately preceded with a semicolon

and

DeclareTableVariableStatement statements cannot be covered, so report falsely as missing coverage

I have also changed where the releases can be downloaded from to use the github releases:

https://github.com/GoEddie/SQLCover/releases

The previous version is still available but I would recommend the latest version.