Thanks for the article. I too struggled with the options. I even created an access project for the SQL database and continued to use Access as much as possible. But It forced me to save every query before executing creating a mess of temp queries.
An even better option is to use the query generator in Visual Studio. Create a Database Project and keep all your stored procedures and queries there (allows source contorl). When you open the TSQL code file, you can highlight portions and right-click to build the Query visually. This is a much better tool, but does not show the output as well as Query Analyzer.
VS2005 has even a better tool.
Dave C.